CDS

Accession Number TCMCG043C29461
gbkey CDS
Protein Id XP_022870868.1
Location complement(join(728401..728570,728674..729019,729624..729726,729820..729884,729993..730100,731188..731280,731390..731437,732394..732492,732602..732718,732802..732855,733125..733217,733303..733383,749351..749456,749524..749558,749980..750066,750163..750240,750318..750386,750464..750562,750837..750906,750985..751298,751381..751438,751543..751595,754467..754536,754855..754928,757174..757374,757474..757758,757882..757920))
Gene LOC111390107
GeneID 111390107
Organism Olea europaea var. sylvestris

Protein

Length 1004aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA417827
db_source XM_023015100.1
Definition pre-mRNA-processing protein 40A-like isoform X4 [Olea europaea var. sylvestris]

EGGNOG-MAPPER Annotation

COG_category A
Description pre-mRNA-processing protein 40A
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12821        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005685        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008360        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016363        [VIEW IN EMBL-EBI]
GO:0016477        [VIEW IN EMBL-EBI]
GO:0016592        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032465        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048870        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051674        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070064        [VIEW IN EMBL-EBI]
GO:0071004        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCCCTCAAAATTTTGGTCCTCCCTTTCCTATGCAATTTCGTCCGCTAGCACCAATGCCACATGGACAGCCATTTATTCCTCCCTCTGCCACTCAGCAATTTCATCCAGTTGGACAAACACAACATGTTGGGTTGCCTCCTGGTCAAATTCAACCTCCACAGTTTTCTCAACCAATGCTGCTATTTCTGCCACAGTCTAGCCAGCCAGGGCAAACTACACCAACTTCATATGCCCAACCAAGTATGCCTATCTCATCAGTCACGCCGCAGTCTCAGCCTACTGGCCCAAGTCCTGGAGTTTCATATTCTTCCCCATACTCTTTCGCTCCATCTTTTGGCCAGCCACAGAATAGCATGAACATGACATCCCAATTCCAACCTGCATTTCAAGTGTCTGCTCCCTTTGGCCCTACTGGAGGACAACCTTTGTTGCACTCTAGTCAGGGTGCTTCACTTGTGGCACCATTACAGCAAACTAGTCAACAACCTTTGGTTGCAGGCCTTACAGCTGCTACTGTGTCGGCTGATAATGGTCTTAATACCACTCAACAGACTGCTTCTGATTGGCAAGAATATCAAGCTGCTGATGGGAGAAGATATTTTTACAACAAAGTTACGAAGCAGTCTAGCTGGGAGAAGCCTCTTGAATTGATGACACCCTTAGAGAGAGCTGATGCCTCAACTGTTTGGAAAGAGTTCACAACTCCTGAGGGTAGAAAGTATTACTACAACAAGGAAACAAAGCTATCTAAATGGACAATACCTGATGAATTGAAGTTGGCCCGTGAAGAGGCTGAAAAGGAAGCTGCCCAGGGAGCAGATACTAACTCTACTGAACCAGCATTTTCTACAGGCACCTCTGCTGAACGACTATCTGCTGCTGTCACCACAGTCAGTTCCACCAACACAACAATGTTTCCTGTCTCTTCAAGCCCTGTTCCAGCGGCCTCCATTACTGATACTATTGCTTCTCCAGTGATGGTTTCTGGATCATCAGCCACCCCCACGATACACACTGCTTCCACAAGTGCGGCTGGTGTGCCCTTAGCTGGAGAAACAGTTGTGCCATCACCTTCTAATTCAACACCAGTGAGCAACATGGAAAGTTCATCCTCCAATGTTGAGACTTCACGGGGTGGGGCTTCTTTTCTGGATATTGAGGAGGCAAAGAAGGGAATGGCTGTTGCTGGAAAAATAAATGTAACTCCAGTGGAAGAGAGACAATTGGATGATGAACCCACGGTATTTGCTAACAAGCAGGAGGCAAAAAATGCATTCAAAGCACTATTAGAATCTGCAAATGTTGAGGCTGATTGGAGTTGGGAGCAGGCCATGCGAATCATAATTAATGACAAACGATATGCTGCACTGAAAACTCTTGGTGAGCGGAAACAAGCGTTCGATGAGTACTTGATGCAAAGAAAAAAATTGGAGGCTGAAGAGAGACGTCTCAGGCAGAGAAAAGTGAAGGAGGAGTTCACAAATATGTTGGAAGAATGTGAAGAACTTACACCATCCACCCGCTGGAGCAAAGCAGCGGCAAAGTTTGAAGGCGATGAGCGTTTCAAGGCTGTTGAACGAGAAGCTGATCGTGAGGATCTGTTTAGGAACTACTTGGTAGATCTTCAGAAAAAGGAAAAGGCGAAGGCTCAAGAGGAGCATCGCCGGAATAGATTGGAGTTTAGGAAATTTCTGGAAACCTGTGCCTTTATCAAGGTTGATAGCCAGTGGCGGAAAGTTCAAGGTCTCTTGGAAGATGATGAAAGATGCAGACGACTCGATAAAATAGACCGCCTCGATATTTTTCAGGAATATATCAGTGACTTGGAGAAGGAGGATGATGAGCAGAAGAAGAGACAGAAGGAACAACTGAAACGAGCTGAGCGTAAAAACCGTGATGAATTTCGCAAGATGATGGAAGATCACATGGCTTCTGGCACTCTTACTGCTAAAACTCACTGGCTTGATTATTGTAAAATGGTCAGGGACTCTGAAGCTTACCAGGCTGTTGCCTCACACACTTCTGGTTCTACGCCGAAGGATTTGTTTGAGGATTTTGTTGAAGAATTGGAGAAAAAGTATGAAGATGACAAAGCCAGTACAAAAGATATGCTGAAGTTGGAAAAGATCACAGTTGCATCGACATGGACAATTGAAGACTTCAAGTCCTTTATTGAACCAAGCAGTGGTTCATTTACGATATCTGACATTAATTTACAGCTCATATATGAGGACCTTATTGAGAGAGCAAAGGAGAAAGAAGAGAAAGAAGCTAAGAAACGTAAACGTCTTGCCAAAGATTTCACTGATAAACTGAGCACCATTAAGGAAGTAAATGCTTTGTCGAGTTGGGAGGAATGCAAACAACTTGTTGAGGACAGCTCTGTGTACAGGTCCATTGGAGAAGAAAACATCTGTAGGGAGATATTTGATGATTATATTAGTCGCTTGCAAGAGAAAGCCAAGGGAAAGGAGCGTAAAAGGCAGGAGGAAAAGGCCAAAAAGGAAAAAGAGAGGGATAAGGAGAAGAGAAAAGACCGAGAGAGAATAGAAAAAGAGAGAGAGAAGGAAAAAGAGAAGGACGAGAAGGAGAAAGACGAAGATCGAGAGCGTGAGAAAGAAAGAGACAAGGTGAAGGAACACTTAAAAAATGATGAAGTAGAGAGTGAGAATATAGATATCACAGACGGTCATGGGCACAGAGACAACAAGAGGAAGGAAAAGGACAAAGAGAGGAAACATAGGAAGTGGCGGCAGATTGATGACGTGAGTTCTGATGAGGATGATAAAGAGAAGTCGAAGAAGTCCCGTCGTCATGGCAGTGACCGTAAAAAGTCAAGAAAGCACGCATATTTGCCTGAATCAGATAGCGCGAGTAGGTGCAAAAGACACAAAAGAGAACACAGGGATGGTAGTACTCGTATTTGTGATCACGAGGAGCTTGAAGATGGTGAACTAGGCGAGGATGGGGGGGATCCTGTGAATTCAACTGGCGGATTTTGGCTCCTTTAA
Protein:  
MAPQNFGPPFPMQFRPLAPMPHGQPFIPPSATQQFHPVGQTQHVGLPPGQIQPPQFSQPMLLFLPQSSQPGQTTPTSYAQPSMPISSVTPQSQPTGPSPGVSYSSPYSFAPSFGQPQNSMNMTSQFQPAFQVSAPFGPTGGQPLLHSSQGASLVAPLQQTSQQPLVAGLTAATVSADNGLNTTQQTASDWQEYQAADGRRYFYNKVTKQSSWEKPLELMTPLERADASTVWKEFTTPEGRKYYYNKETKLSKWTIPDELKLAREEAEKEAAQGADTNSTEPAFSTGTSAERLSAAVTTVSSTNTTMFPVSSSPVPAASITDTIASPVMVSGSSATPTIHTASTSAAGVPLAGETVVPSPSNSTPVSNMESSSSNVETSRGGASFLDIEEAKKGMAVAGKINVTPVEERQLDDEPTVFANKQEAKNAFKALLESANVEADWSWEQAMRIIINDKRYAALKTLGERKQAFDEYLMQRKKLEAEERRLRQRKVKEEFTNMLEECEELTPSTRWSKAAAKFEGDERFKAVEREADREDLFRNYLVDLQKKEKAKAQEEHRRNRLEFRKFLETCAFIKVDSQWRKVQGLLEDDERCRRLDKIDRLDIFQEYISDLEKEDDEQKKRQKEQLKRAERKNRDEFRKMMEDHMASGTLTAKTHWLDYCKMVRDSEAYQAVASHTSGSTPKDLFEDFVEELEKKYEDDKASTKDMLKLEKITVASTWTIEDFKSFIEPSSGSFTISDINLQLIYEDLIERAKEKEEKEAKKRKRLAKDFTDKLSTIKEVNALSSWEECKQLVEDSSVYRSIGEENICREIFDDYISRLQEKAKGKERKRQEEKAKKEKERDKEKRKDRERIEKEREKEKEKDEKEKDEDREREKERDKVKEHLKNDEVESENIDITDGHGHRDNKRKEKDKERKHRKWRQIDDVSSDEDDKEKSKKSRRHGSDRKKSRKHAYLPESDSASRCKRHKREHRDGSTRICDHEELEDGELGEDGGDPVNSTGGFWLL